In a nutshell, my server load began surging and remaining very high. It was EXIM. I shut down EXIM and server load went back to normal. I suspected the server had been compromised. While walking through with someone familiar with security, we disabled open directory access (which I am told is a crucial setting to be disabled for any secure environment). Upon doing so, my main site for multi-site manager continued to work while other sites did not; this message appears rather than the website:
The system path does not appear to be set correctly. Please open your path.php file and correct the path.
I opened the config file and the sys_path line refernced the folder but had no path before it. I started experimenting but the most I was able to do was add the complete path. Only the following worked to keep my main site up but I still have all of the other sites down:
/home/mysite/public_html/myadminfolder
Previously I just had:
./myadminfolder
Any ideas on how I can fix this?