Hi Nick,
I made the suggestion to rollback because you had a live site and didn’t sound comfortable with the way it was displaying certain entries. It was only a suggestion, so if you are more uncomfortable with restoring a database do not feel as though you have to do this. Supporting the usage of phpMyAdmin is a bit outside of our support scope, but we will do our best to help.
As it sounds like you have a backup of the site’s database in both 1.6.8 and 1.6.9 states, there should not be any data loss regardless of what you choose to do. If you want to try a rollback, you would restore the 1.6.8 files, restore the database from the 1.6.8 SQL backup, and there should not be a need to run the update wizard.